/***********************************************************************************
*	(c) Ger Versluis 2000 version 5.411 24 December 2001 (updated Jan 31st, 2003 by Dynamic Drive for Opera7)
*	For info write to menus@burmees.nl		          *
*	You may remove all comments for faster loading	          *		
***********************************************************************************/

	var NoOffFirstLineMenus=3;			// Number of first level items
	var LowBgColor='white';			        // Background color when mouse is not over
	var LowSubBgColor='white';			// Background color when mouse is not over on subs
	var HighBgColor='black';			// Background color when mouse is over
	var HighSubBgColor='black';			// Background color when mouse is over on subs
	var FontLowColor='black';			// Font color when mouse is not over
	var FontSubLowColor='black';			// Font color subs when mouse is not over
	var FontHighColor='white';			// Font color when mouse is over
	var FontSubHighColor='white';			// Font color subs when mouse is over
	var BorderColor='black';			// Border color
	var BorderSubColor='black';			// Border color for subs
	var BorderWidth=2;				// Border width
	var BorderBtwnElmnts=1;				// Border between elements 1 or 0
	var FontFamily="arial,comic sans ms,technical"	// Font family menu items
	var FontSize=9;					// Font size menu items
	var FontBold=1;					// Bold menu items 1 or 0
	var FontItalic=0;				// Italic menu items 1 or 0
	var MenuTextCentered='left';			// Item text position 'left', 'center' or 'right'
	var MenuCentered='left';			// Menu horizontal position 'left', 'center' or 'right'
	var MenuVerticalCentered='top';			// Menu vertical position 'top', 'middle','bottom' or static
	var ChildOverlap=0;				// horizontal overlap child/ parent
	var ChildVerticalOverlap=0;			// vertical overlap child/ parent
	var StartTop=400;				// Menu offset x coordinate
	var StartLeft=1;				// Menu offset y coordinate
	var VerCorrect=0;				// Multiple frames y correction
	var HorCorrect=0;				// Multiple frames x correction
	var LeftPaddng=3;				// Left padding
	var TopPaddng=2;				// Top padding
	var FirstLineHorizontal=0;			// SET TO 1 FOR HORIZONTAL MENU, 0 FOR VERTICAL
	var MenuFramesVertical=1;			// Frames in cols or rows 1 or 0
	var DissapearDelay=1000;			// delay before menu folds in
	var TakeOverBgColor=1;				// Menu frame takes over background color subitem frame
	var FirstLineFrame='navig';			// Frame where first level appears
	var SecLineFrame='space';			// Frame where sub levels appear
	var DocTargetFrame='_self';			// Frame where target documents appear
	var TargetLoc='';				// span id for relative positioning
	var HideTop=0;					// Hide first level when loading new document 1 or 0
	var MenuWrap=1;					// enables/ disables menu wrap 1 or 0
	var RightToLeft=0;				// enables/ disables right to left unfold 1 or 0
	var UnfoldsOnClick=0;				// Level 1 unfolds onclick/ onmouseover
	var WebMasterCheck=0;				// menu tree checking on or off 1 or 0
	var ShowArrow=1;				// Uses arrow gifs when 1
	var KeepHilite=1;				// Keep selected path highligthed
	var Arrws=['imgs/tri.gif',5,10,'imgs/tridown.gif',10,5,'imgs/trileft.gif',5,10];	// Arrow source, width and height

function BeforeStart(){return}
function AfterBuild(){return}
function BeforeFirstOpen(){return}
function AfterCloseAll(){return}


// Menu tree
//	MenuX=new Array(Text to show, Link, background image (optional), number of sub elements, height, width);
//	For rollover images set "Text to show" to:  "rollover:Image1.jpg:Image2.jpg"


        Menu1=new Array("AMBER 8 Files","","",2,25,150);
	                Menu1_1=new Array("Molecular Dynamics Simulation","","",3,25,280);
				Menu1_1_1=new Array("Constant Pressure (NPT)","http://www.glycam.com/AMBER8/dynamicSimlStep8_1.jsp?imin=0&ntb=2&dielc=1","",0,25,280);	
				Menu1_1_2=new Array("Constant Volume (NVT)","http://www.glycam.com/AMBER8/dynamicSimlStep8_1.jsp?imin=0&ntb=1&dielc=1&ntp=0","",0);	
				Menu1_1_3=new Array("Implicit Solvation","http://www.glycam.com/AMBER8/dynamicSimlStep8_1.jsp?imin=0&ntb=0&dielc=1&ntp=0","",0);	
			Menu1_2=new Array("Energy Minimization","","",2,25,280);
				Menu1_2_1=new Array("Constant Volume Minimization","http://www.glycam.com/AMBER8/minimization8.jsp?imin=1&ntb=1&dielc=1&ntp=0","",0,25,300);	
				Menu1_2_2=new Array("Implicit Solvation Minimization","http://www.glycam.com/AMBER8/minimization8.jsp?imin=1&ntb=0&dielc=1&ntp=0","",0);	
        Menu2=new Array("AMBER 7 Files","","",2,25,150);
	                Menu2_1=new Array("Molecular Dynamics Simulation","","",3,30,280);
				Menu2_1_1=new Array("Constant Pressure (NPT)","dynamicSimlStep7_1.jsp?imin=0&ntb=2&dielc=1","",0,25,280);	
				Menu2_1_2=new Array("Constant Volume (NVT)","dynamicSimlStep7_1.jsp?imin=0&ntb=1&dielc=1&ntp=0","",0);	
				Menu2_1_3=new Array("Implicit Solvation","dynamicSimlStep7_1.jsp?imin=0&ntb=0&dielc=1&ntp=0","",0);	
			Menu2_2=new Array("Energy Minimization","","",2,30,280);
				Menu2_2_1=new Array("Constant Volume Minimization","minimization7.jsp?imin=1&ntb=1&dielc=1&ntp=0","",0,25,300);	
				Menu2_2_2=new Array("Implicit Solvation Minimization","minimization7.jsp?imin=1&ntb=0&dielc=1&ntp=0","",0);	
        Menu3=new Array("AMBER 5 Files","","",2,25,150);
			Menu3_1=new Array("Molecular Dynamics Simulation","","",2,25,280);
					Menu3_1_1=new Array("Constant Pressure (NPT)","http://www.glycam.com/AMBER5/dynamicSimlStep5_1.jsp?imin=0&ntb=2&dielc=1","",0,25,280);	
					Menu3_1_2=new Array("Constant Volume (NVT)","http://www.glycam.com/AMBER5/dynamicSimlStep5_1.jsp?imin=0&ntb=1&dielc=1&ntp=0","",0);	
			Menu3_2=new Array("Energy Minimization","","",1,25,280);
					Menu3_2_1=new Array("Constant Volume Minimization","http://www.glycam.com/AMBER5/minimization5.jsp?imin=1&ntb=1&dielc=1&ntp=0","",0,25,300);	

/*
Menu2=new Array("Create PDB,Coordinate & Topology files","","",2,40,250);
        Menu2_1=new Array("FF94/GLYCAM2000","","",0,25,200);
           // Menu2_1_1=new Array("Carbohydrates","","",0,25,140);
           // Menu2_1_2=new Array("Proteins","","",0,30,150);	
           // Menu2_1_3=new Array("Glycoproteins","","",0,25,140);	

	Menu2_2=new Array("FF94/GLYCAM04","","",3,30,200);
	    Menu2_2_1=new Array("Carbohydrates","http://www.glycam.com/CCRC/branched_builder.jsp","",0,25,140);	
	    Menu2_2_2=new Array("Proteins","http://www.glycam.com/CCRC/uploadIndex.html","",0,25,140);	
            Menu2_2_3=new Array("Glycoproteins","http://www.glycam.com/CCRC/GlycoProteins/uploadIndex.html","",0,25,140);
*/