Carbohydrate Conformation

Glycan Conformation

Carbohydrate Conformation

Carbohydrate Conformation,e Carbohydrate Builder, Protein Builder, Glycoprotein Builder, AMBER, Glycam, Molecular Dynamics, Force Fields, Simulation, Glycoconjugates, Glycosylation,Oligosaccharide Library,Charmm,CRD PDB Download Input Configurator

Carbohydrate Conformation 1

Online Carbohydrate Builder, Glycoprotein Builder

Research in the Woods group examines the relationship between carbohydrate conformation and biological recognition.

Oligosaccharide Library

Areas of particular interest include carbohydrate antigenicity in immunological events, carbohydrate-processing enzymes, and the development of appropriate simulational methods for these systems.

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The flexibility of biomolecules is ideally suited to analysis by molecular dynamics simulations, whereas quantum mechanical methods are applied to examine enzyme mechanisms and develop the GLYCAM force field parameters.

Oligosaccharide Download

The relationship between carbohydrate sequence/structure and the affinity of carbohydrate-protein interactions is amenable to study by free energy perturbation and direct deltaG calculations. The computational methods are complimented by experimental techniques, such as NMR spectroscopy, X-ray crystallography, and mass spectrometry.

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You can review molecular dynamic simulations in deciding glycan conformation (Carbohydrate Conformation).

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